J Genomics 2024; 12:55-57. doi:10.7150/jgen.94500 This volume Cite

Short Research Paper

Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides

Rishi R. Burlakoti1✉, Sanjib Sapkota1,3, Mark Lubberts2

1. Science and Technology Branch, Agassiz Research and Development Centre, Agriculture and Agri-Food Canada, Agassiz, BC, Canada.
2. Science and Technology Branch, Summerland Research and Development Centre, Agriculture and Agri-Food Canada, Summerland, BC, Canada.
3. Abbotsford Agriculture Centre, Ministry of Agriculture and Food, Abbotsford, BC, Canada.

Citation:
Burlakoti RR, Sapkota S, Lubberts M. Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides. J Genomics 2024; 12:55-57. doi:10.7150/jgen.94500. https://www.jgenomics.com/v12p0055.htm
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Abstract

Graphic abstract

Phytophthora gonapodyides is a newly reported oomycetes pathogen associated with root rot of red raspberry. We generated high-quality whole genome resource for P. gonapodyides, which was pathogenic on red raspberry. The genome size was 88,717,598 bp with a BUSCO completeness score of 93.9%. This genome resource provides insight on pathogen biology of Phytophthora spp. causing root rot of raspberry. To our best knowledge, this is the first complete genome assembly of plant pathogenic P. gonapodyides.

Keywords: Phytophthora gonapodyides, oomycete, Illumina Sequencing, red raspberry


Citation styles

APA
Burlakoti, R.R., Sapkota, S., Lubberts, M. (2024). Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides. Journal of Genomics, 12, 55-57. https://doi.org/10.7150/jgen.94500.

ACS
Burlakoti, R.R.; Sapkota, S.; Lubberts, M. Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides. J. Genomics 2024, 12, 55-57. DOI: 10.7150/jgen.94500.

NLM
Burlakoti RR, Sapkota S, Lubberts M. Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides. J Genomics 2024; 12:55-57. doi:10.7150/jgen.94500. https://www.jgenomics.com/v12p0055.htm

CSE
Burlakoti RR, Sapkota S, Lubberts M. 2024. Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides. J Genomics. 12:55-57.

This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions.
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