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Volume 5; 2017

Short Research Communication
First Draft Genome Sequence of the Dourine Causative Agent: Trypanosoma Equiperdum Strain OVI
Laurent Hébert, Bouziane Moumen, Anthony Madeline, Sascha Steinbiss, Latifa Lakhdar, Nick Van Reet, Philippe Büscher, Claire Laugier, Julien Cauchard, Sandrine Petry
J. Genomics 2017; 5: 1-3. doi:10.7150/jgen.17904
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Research Paper
Detection of Intestinal Pathogens in River, Shore, and Drinking Water in Lima, Peru
David C. Grothen, Sydney J. Zach, Paul H. Davis
J. Genomics 2017; 5: 4-11. doi:10.7150/jgen.18378
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Research Paper
Genomic characterization of eight Ensifer strains isolated from pristine caves and a whole genome phylogeny of Ensifer (Sinorhizobium)
Heerman Kumar Sandra Kumar, Han Ming Gan, Mun Hua Tan, Wilhelm Wei Han Eng, Hazel A. Barton, André O. Hudson, Michael A. Savka
J. Genomics 2017; 5: 12-15. doi:10.7150/jgen.17863
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Research Paper
Exploration of small RNA-seq data for small non-coding RNAs in Human Colorectal Cancer
Srinivas V Koduru, Amit K Tiwari, Sprague W Hazard, Milind Mahajan, Dino J Ravnic
J. Genomics 2017; 5: 16-31. doi:10.7150/jgen.18856
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Short Research Communication
Complete genome sequence and functional study of the fibrinolytic enzyme-producing bacterium Leuconostoc holzapfelii 5H4, a silage probiotic
Hye Sun Kim, Ouk Kyu Han, Youn-Sig Kwak
J. Genomics 2017; 5: 32-35. doi:10.7150/jgen.19407
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Research Paper
Metagenomic Analysis of a Complex Community Present in Pond Sediment
Vivek Negi, Rup Lal
J. Genomics 2017; 5: 36-47. doi:10.7150/jgen.16685
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Short Research Communication
Whole-genome Sequencing of Vibrio sinaloensis T47, a Tropical Marine Isolate with Quorum Sensing Properties
Nur Izzati Mohamad, Kah Yan How, Wai-Fong Yin, Kok-Gan Chan
J. Genomics 2017; 5: 48-50. doi:10.7150/jgen.16163
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Short Research Communication
Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
Tri Yuliana, Nobuyoshi Nakajima, Shigeki Yamamura, Masaru Tomita, Haruo Suzuki, Seigo Amachi
J. Genomics 2017; 5: 51-53. doi:10.7150/jgen.19846
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Research Paper
De Novo Assembly of the Liver Transcriptome of the European Starling, Sturnus vulgaris
Mark F. Richardson, William B. Sherwin, Lee A. Rollins
J. Genomics 2017; 5: 54-57. doi:10.7150/jgen.19504
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Research Paper
CNV Analysis of Host Responses to Porcine Reproductive and Respiratory Syndrome Virus Infection
El Hamidi A. Hay, Igseo Choi, Lingyang Xu, Yang Zhou, Robert R. R. Rowland, Joan K. Lunney, George E. Liu
J. Genomics 2017; 5: 58-63. doi:10.7150/jgen.20358
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Short Research Paper
Draft Genome Sequence of the Symbiotic Frankia Sp. Strain KB5 Isolated from Root Nodules of Casuarina equisetifolia
Céline Pesce, Erik Swanson, Stephen Simpson, Krystalynne Morris, W. Kelley Thomas, Louis S. Tisa, Anita Sellstedt
J. Genomics 2017; 5: 64-67. doi:10.7150/jgen.20887
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Short Research Paper
Draft Genome Sequence of a Virulent Strain of Pasteurella Multocida Isolated From Alpaca
Raquel Enma Hurtado, Flavia Aburjaile, Diego Mariano, Marcus Vinicius Canário, Leandro Benevides, Daniel Antonio Fernandez, Nataly Olivia Allasi, Rocio Rimac, Julio Eduardo Juscamayta, Jorge Enrique Maximiliano, Raul Hector Rosadio, Vasco Azevedo, Lenin Maturrano
J. Genomics 2017; 5: 68-70. doi:10.7150/jgen.19297
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Short Research Paper
Complete Genome Sequence and Comparative Genomics of a Streptococcus pyogenes emm3 Strain M3-b isolated from a Japanese Patient with Streptococcal Toxic Shock Syndrome
Kohei Ogura, Shinya Watanabe, Teruo Kirikae, Tohru Miyoshi-Akiyama
J. Genomics 2017; 5: 71-74. doi:10.7150/jgen.20915
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Short Research Paper
Complete Genome Sequence of Actinomadura Parvosata Subsp. Kistnae, A Rich Source of Novel Natural Product (Bio-)Chemistry
Kalina Kusserow, Tobias A. M. Gulder
J. Genomics 2017; 5: 75-76. doi:10.7150/jgen.19673
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Research Paper
A glimpse into the genetic basis of symbiosis between Hydrogenophaga and their helper strains in the biodegradation of 4-aminobenzenesulfonate
Kangsan Kim, Han Ming Gan
J. Genomics 2017; 5: 77-82. doi:10.7150/jgen.20216
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Research Paper
Draft genome and SNPs associated with carotenoid accumulation in adductor muscles of bay scallop (Argopecten irradians)
Xuedi Du, Kai Song, Jinpeng Wang, Rihao Cong, Li Li, Guofan Zhang
J. Genomics 2017; 5: 83-90. doi:10.7150/jgen.19146
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Research Paper
Genome Comparison of Pseudomonas fluorescens UM270 with Related Fluorescent Strains Unveils Genes Involved in Rhizosphere Competence and Colonization
Julie E. Hernández-Salmerón, Gabriel Moreno-Hagelsieb, Gustavo Santoyo
J. Genomics 2017; 5: 91-98. doi:10.7150/jgen.21588
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Research Paper
Small Non-coding RNA Abundance in Adrenocortical Carcinoma: A Footprint of a Rare Cancer
Srinivas V. Koduru, Ashley N. Leberfinger, Dino J. Ravnic
J. Genomics 2017; 5: 99-118. doi:10.7150/jgen.22060
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Short Research Paper
Permanent Draft Genome sequence for Frankia sp. strain CcI49, a Nitrogen-Fixing Bacterium Isolated from Casuarina cunninghamiana that Infects Elaeagnaceae
Samira Mansour, Erik Swanson, Zakkary McNutt, Céline Pesce, Kelsey Harrington, Feseha Abebe-Alele, Stephen Simpson, Krystalynne Morris, W. Kelley Thomas, Louis S. Tisa
J. Genomics 2017; 5: 119-123. doi:10.7150/jgen.22138
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Short Research Paper
Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water
Samadhan Waghmode, Laxmikant Dama, Tejashri Hingamire, Nidhi Bharti, Swapnil Doijad, Mangesh Suryavanshi
J. Genomics 2017; 5: 124-127. doi:10.7150/jgen.21724
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Short Research Paper
Exploring Effects of Sex and Diet on Drosophila melanogaster Head Gene Expression
Maria D. L. A. Jaime, Juan Hurtado, Mariana Ramirez Loustalot-Laclette, Brian Oliver, Therese Markow
J. Genomics 2017; 5: 128-131. doi:10.7150/jgen.22393
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